Information for motif18


Reverse Opposite:

p-value:1e-62
log p-value:-1.440e+02
Information Content per bp:1.457
Number of Target Sequences with motif68.0
Percentage of Target Sequences with motif1.79%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets117.3 +/- 53.1bp
Average Position of motif in Background75.0 +/- 29.6bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL006.1_BREu/Jaspar

Match Rank:1
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:TCCGAGGCGC---
-----GGCGCGCT

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:2
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----TCCGAGGCGC-
ATTGCCTGAGGCAAT

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:3
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----TCCGAGGCGC
WTGSCCTSAGGS--

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:4
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----TCCGAGGCGC-
ATTGCCTGAGGCGAA

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----TCCGAGGCGC
ATGCCCTGAGGC--

PB0052.1_Plagl1_1/Jaspar

Match Rank:6
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TCCGAGGCGC------
NNNGGGGCGCCCCCNN

PB0113.1_E2F3_2/Jaspar

Match Rank:7
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TCCGAGGCGC------
NNNNTTGGCGCCGANNN

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:8
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----TCCGAGGCGC-
ATTCCCTGAGGGGAA

MA0506.1_NRF1/Jaspar

Match Rank:9
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TCCGAGGCGC
TGCGCAGGCGC

PB0112.1_E2F2_2/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TCCGAGGCGC-------
CCTTCGGCGCCAAAAGG