Information for motif19


Reverse Opposite:

p-value:1e-61
log p-value:-1.424e+02
Information Content per bp:1.964
Number of Target Sequences with motif77.0
Percentage of Target Sequences with motif2.02%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets104.4 +/- 52.8bp
Average Position of motif in Background137.8 +/- 29.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0018.2_CREB1/Jaspar

Match Rank:1
Score:0.84
Offset:0
Orientation:forward strand
Alignment:TGACGGCA
TGACGTCA

Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.81
Offset:-2
Orientation:forward strand
Alignment:--TGACGGCA
GATGACGTCA

PB0004.1_Atf1_1/Jaspar

Match Rank:3
Score:0.81
Offset:-4
Orientation:reverse strand
Alignment:----TGACGGCA----
NCGATGACGTCATCGN

JunD(bZIP)/K562-JunD-ChIP-Seq/Homer

Match Rank:4
Score:0.80
Offset:-3
Orientation:reverse strand
Alignment:---TGACGGCA-
NGATGACGTCAT

CRE(bZIP)/Promoter/Homer

Match Rank:5
Score:0.79
Offset:-3
Orientation:forward strand
Alignment:---TGACGGCA-
CGGTGACGTCAC

PB0038.1_Jundm2_1/Jaspar

Match Rank:6
Score:0.78
Offset:-4
Orientation:forward strand
Alignment:----TGACGGCA----
CCGATGACGTCATCGT

c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.76
Offset:-3
Orientation:reverse strand
Alignment:---TGACGGCA-
NGATGACGTCAT

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:8
Score:0.72
Offset:0
Orientation:forward strand
Alignment:TGACGGCA
TGACGT--

MA0492.1_JUND_(var.2)/Jaspar

Match Rank:9
Score:0.70
Offset:-5
Orientation:forward strand
Alignment:-----TGACGGCA--
AAAGATGATGTCATC

MA0488.1_JUN/Jaspar

Match Rank:10
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----TGACGGCA-
AAGATGATGTCAT