Information for motif21


Reverse Opposite:

p-value:1e-23
log p-value:-5.343e+01
Information Content per bp:1.530
Number of Target Sequences with motif35.0
Percentage of Target Sequences with motif0.92%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets78.0 +/- 46.6bp
Average Position of motif in Background136.4 +/- 16.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0502.1_NFYB/Jaspar

Match Rank:1
Score:0.80
Offset:-6
Orientation:forward strand
Alignment:------ACCAATGA-
AAATGGACCAATCAG

POL004.1_CCAAT-box/Jaspar

Match Rank:2
Score:0.78
Offset:-4
Orientation:forward strand
Alignment:----ACCAATGA
ACTAGCCAATCA

NFY(CCAAT)/Promoter/Homer

Match Rank:3
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-ACCAATGA-
AGCCAATCGG

MA0060.2_NFYA/Jaspar

Match Rank:4
Score:0.75
Offset:-3
Orientation:reverse strand
Alignment:---ACCAATGA-------
TGGACCAATCAGCACTCT

PH0107.1_Msx2/Jaspar

Match Rank:5
Score:0.71
Offset:-4
Orientation:forward strand
Alignment:----ACCAATGA-----
GAAGACCAATTAGCGCT

PH0005.1_Barhl1/Jaspar

Match Rank:6
Score:0.70
Offset:-4
Orientation:forward strand
Alignment:----ACCAATGA----
AACAACCAATTAATTC

PH0006.1_Barhl2/Jaspar

Match Rank:7
Score:0.70
Offset:-4
Orientation:forward strand
Alignment:----ACCAATGA----
AAAAACCAATTAAGAA

MA0125.1_Nobox/Jaspar

Match Rank:8
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:ACCAATGA
ACCAATTA

PH0108.1_Msx3/Jaspar

Match Rank:9
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----ACCAATGA----
CAAAACCAATTAATTT

MA0087.1_Sox5/Jaspar

Match Rank:10
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-ACCAATGA
NAACAAT--