Information for motif5


Reverse Opposite:

p-value:1e-167
log p-value:-3.852e+02
Information Content per bp:1.677
Number of Target Sequences with motif138.0
Percentage of Target Sequences with motif3.62%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets95.7 +/- 55.3bp
Average Position of motif in Background132.5 +/- 39.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0052.1_Plagl1_1/Jaspar

Match Rank:1
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--CGGGACGCCC----
NNNGGGGCGCCCCCNN

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:2
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:CGGGACGCCC-
-GCCMCRCCCH

MA0039.2_Klf4/Jaspar

Match Rank:3
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:CGGGACGCCC-
-GCCCCACCCA

Sp1(Zf)/Promoter/Homer

Match Rank:4
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CGGGACGCCC--
GGCCCCGCCCCC

PB0094.1_Zfp128_1/Jaspar

Match Rank:5
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---CGGGACGCCC----
TTNGGGTACGCCNNANN

PB0180.1_Sp4_2/Jaspar

Match Rank:6
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--CGGGACGCCC---
NNGGCCACGCCTTTN

PB0076.1_Sp4_1/Jaspar

Match Rank:7
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CGGGACGCCC-------
GGTCCCGCCCCCTTCTC

POL006.1_BREu/Jaspar

Match Rank:8
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CGGGACGCCC
-AGCGCGCC-

PB0143.1_Klf7_2/Jaspar

Match Rank:9
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CGGGACGCCC-----
AAGCATACGCCCAACTT

PB0039.1_Klf7_1/Jaspar

Match Rank:10
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CGGGACGCCC----
TCGACCCCGCCCCTAT