Information for motif6


Reverse Opposite:

p-value:1e-140
log p-value:-3.240e+02
Information Content per bp:1.854
Number of Target Sequences with motif102.0
Percentage of Target Sequences with motif2.68%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets104.7 +/- 53.1bp
Average Position of motif in Background115.8 +/- 38.9bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1(Zf)/Promoter/Homer

Match Rank:1
Score:0.92
Offset:1
Orientation:reverse strand
Alignment:CGCCGCCATCTT-
-GCCGCCATCTTG

MA0095.2_YY1/Jaspar

Match Rank:2
Score:0.89
Offset:1
Orientation:reverse strand
Alignment:CGCCGCCATCTT-
-GCNGCCATCTTG

MA0461.1_Atoh1/Jaspar

Match Rank:3
Score:0.69
Offset:4
Orientation:reverse strand
Alignment:CGCCGCCATCTT
----GCCATCTG

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:4
Score:0.68
Offset:4
Orientation:forward strand
Alignment:CGCCGCCATCTT--
----GCCATCTGTT

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:5
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:CGCCGCCATCTT-----
CCNNACCATCTGGCCTN

PB0164.1_Smad3_2/Jaspar

Match Rank:6
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----CGCCGCCATCTT-
TACGCCCCGCCACTCTG

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski et al.)/Homer

Match Rank:7
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CGCCGCCATCTT-------
ANAGTGCCACCTGGTGGCCA

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:8
Score:0.57
Offset:4
Orientation:forward strand
Alignment:CGCCGCCATCTT--
----RCCATMTGTT

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CGCCGCCATCTT-----
CNNBRGCGCCCCCTGSTGGC

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:10
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:CGCCGCCATCTT----
----GCCAGCTGBTNB