Information for motif7


Reverse Opposite:

p-value:1e-138
log p-value:-3.193e+02
Information Content per bp:1.698
Number of Target Sequences with motif255.0
Percentage of Target Sequences with motif6.69%
Number of Background Sequences with motif19.7
Percentage of Background Sequences with motif0.86%
Average Position of motif in Targets102.9 +/- 52.0bp
Average Position of motif in Background91.6 +/- 43.5bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0046.1_HNF1A/Jaspar

Match Rank:1
Score:0.87
Offset:-3
Orientation:reverse strand
Alignment:---AATSATTAAC-
GNTAATNATTAACC

MA0153.1_HNF1B/Jaspar

Match Rank:2
Score:0.82
Offset:-2
Orientation:forward strand
Alignment:--AATSATTAAC
TTAATATTTAAC

Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer

Match Rank:3
Score:0.81
Offset:-2
Orientation:reverse strand
Alignment:--AATSATTAAC-
TTAATGTTTAACC

MF0010.1_Homeobox_class/Jaspar

Match Rank:4
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:AATSATTAAC
AATTATT---

MA0476.1_FOS/Jaspar

Match Rank:5
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:AATSATTAAC-
NATGAGTCANN

MA0462.1_BATF::JUN/Jaspar

Match Rank:6
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--AATSATTAAC
GAAATGACTCA-

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:7
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:AATSATTAAC
--YCATTAMC

MA0491.1_JUND/Jaspar

Match Rank:8
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:AATSATTAAC-
NATGAGTCACN

PH0051.1_Hoxa4/Jaspar

Match Rank:9
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----AATSATTAAC---
GATTATTAATTAACTTG

PB0142.1_Jundm2_2/Jaspar

Match Rank:10
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---AATSATTAAC---
ATTGATGAGTCACCAA