Information for motif17


Reverse Opposite:

p-value:1e-14
log p-value:-3.354e+01
Information Content per bp:1.717
Number of Target Sequences with motif86.0
Percentage of Target Sequences with motif2.25%
Number of Background Sequences with motif388.9
Percentage of Background Sequences with motif0.85%
Average Position of motif in Targets106.3 +/- 55.9bp
Average Position of motif in Background94.3 +/- 58.8bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

GFY(?)/Promoter/Homer

Match Rank:1
Score:0.99
Offset:0
Orientation:forward strand
Alignment:ACTACAATTCCC
ACTACAATTCCC

GFY-Staf/Promoters/Homer

Match Rank:2
Score:0.82
Offset:-1
Orientation:forward strand
Alignment:-ACTACAATTCCC-------
AACTACAATTCCCAGAATGC

MA0019.1_Ddit3::Cebpa/Jaspar

Match Rank:3
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-ACTACAATTCCC
AGATGCAATCCC-

MA0056.1_MZF1_1-4/Jaspar

Match Rank:4
Score:0.55
Offset:8
Orientation:reverse strand
Alignment:ACTACAATTCCC--
--------TCCCCA

PB0032.1_IRC900814_1/Jaspar

Match Rank:5
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----ACTACAATTCCC
ATTTACGACAAATAGC

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:ACTACAATTCCC--
----CACTTCCTCT

PB0165.1_Sox11_2/Jaspar

Match Rank:7
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---ACTACAATTCCC
NNCNNAACAATTNT-

MA0511.1_RUNX2/Jaspar

Match Rank:8
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---ACTACAATTCCC
CAAACCACAAACCCC

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:9
Score:0.52
Offset:5
Orientation:forward strand
Alignment:ACTACAATTCCC---
-----HTTTCCCASG

PB0091.1_Zbtb3_1/Jaspar

Match Rank:10
Score:0.52
Offset:-6
Orientation:forward strand
Alignment:------ACTACAATTCCC
AATCGCACTGCATTCCG-