Information for motif20


Reverse Opposite:

p-value:1e-4
log p-value:-1.093e+01
Information Content per bp:1.782
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.21%
Number of Background Sequences with motif13.0
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets86.4 +/- 42.7bp
Average Position of motif in Background68.3 +/- 41.8bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.38
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0174.1_Sox30_2/Jaspar

Match Rank:1
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CGTAGTATACTA---
NCGTATTATAATCNTA

PB0079.1_Sry_1/Jaspar

Match Rank:2
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CGTAGTATACTA---
TATAATTATAATATTC

FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer

Match Rank:3
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CGTAGTATACTA--
--NDGTAAACARRN

MA0032.1_FOXC1/Jaspar

Match Rank:4
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CGTAGTATACTA
GGTAAGTA-----

PB0081.1_Tcf1_1/Jaspar

Match Rank:5
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CGTAGTATACTA----
ACTTAGTTAACTAAAAA

PB0064.1_Sox14_1/Jaspar

Match Rank:6
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CGTAGTATACTA---
GCTAATTATAATTATC

PB0016.1_Foxj1_1/Jaspar

Match Rank:7
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CGTAGTATACTA-----
-AAAGTAAACAAAAATT

MA0593.1_FOXP2/Jaspar

Match Rank:8
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CGTAGTATACTA-
--AAGTAAACAAA

PB0106.1_Arid5a_2/Jaspar

Match Rank:9
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CGTAGTATACTA-----
CATACAATACGAAATAA

PB0069.1_Sox21_1/Jaspar

Match Rank:10
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CGTAGTATACTA---
TTTAATTATAATTAAG