Information for motif21


Reverse Opposite:

p-value:1e-4
log p-value:-1.053e+01
Information Content per bp:1.753
Number of Target Sequences with motif31.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif161.3
Percentage of Background Sequences with motif0.35%
Average Position of motif in Targets93.8 +/- 52.5bp
Average Position of motif in Background95.8 +/- 61.4bp
Strand Bias (log2 ratio + to - strand density)-1.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0516.1_SP2/Jaspar

Match Rank:1
Score:0.68
Offset:0
Orientation:forward strand
Alignment:GCCCTGCCTCCG---
GCCCCGCCCCCTCCC

Sp1(Zf)/Promoter/Homer

Match Rank:2
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GCCCTGCCTCCG
GGCCCCGCCCCC-

MA0079.3_SP1/Jaspar

Match Rank:3
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GCCCTGCCTCCG
GCCCCGCCCCC-

POL003.1_GC-box/Jaspar

Match Rank:4
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GCCCTGCCTCCG
NAGCCCCGCCCCCN

MA0598.1_EHF/Jaspar

Match Rank:5
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GCCCTGCCTCCG
--CCTTCCTG--

MA0162.2_EGR1/Jaspar

Match Rank:6
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GCCCTGCCTCCG--
CCCCCGCCCCCGCC

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:7
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GCCCTGCCTCCG
NNACTTGCCTT--

PB0124.1_Gabpa_2/Jaspar

Match Rank:8
Score:0.54
Offset:2
Orientation:forward strand
Alignment:GCCCTGCCTCCG------
--CCGTCTTCCCCCTCAC

MA0146.2_Zfx/Jaspar

Match Rank:9
Score:0.53
Offset:-8
Orientation:forward strand
Alignment:--------GCCCTGCCTCCG
GGGGCCGAGGCCTG------

MA0471.1_E2F6/Jaspar

Match Rank:10
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:GCCCTGCCTCCG
-NCTTCCCGCCC