Information for motif3


Reverse Opposite:

p-value:1e-110
log p-value:-2.556e+02
Information Content per bp:1.721
Number of Target Sequences with motif834.0
Percentage of Target Sequences with motif21.86%
Number of Background Sequences with motif4396.0
Percentage of Background Sequences with motif9.60%
Average Position of motif in Targets101.1 +/- 52.7bp
Average Position of motif in Background100.1 +/- 59.7bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.24
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer

Match Rank:1
Score:0.94
Offset:0
Orientation:forward strand
Alignment:SWBTGTTTRC--
NYYTGTTTACHN

MA0593.1_FOXP2/Jaspar

Match Rank:2
Score:0.94
Offset:1
Orientation:reverse strand
Alignment:SWBTGTTTRC--
-TNTGTTTACTT

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan et al.)/Homer

Match Rank:3
Score:0.93
Offset:2
Orientation:forward strand
Alignment:SWBTGTTTRC
--CTGTTTAC

MA0031.1_FOXD1/Jaspar

Match Rank:4
Score:0.93
Offset:2
Orientation:reverse strand
Alignment:SWBTGTTTRC
--ATGTTTAC

MA0157.1_FOXO3/Jaspar

Match Rank:5
Score:0.92
Offset:3
Orientation:reverse strand
Alignment:SWBTGTTTRC-
---TGTTTACA

PB0016.1_Foxj1_1/Jaspar

Match Rank:6
Score:0.91
Offset:-3
Orientation:reverse strand
Alignment:---SWBTGTTTRC---
NNNNTTTGTTTACNNT

MF0005.1_Forkhead_class/Jaspar

Match Rank:7
Score:0.90
Offset:3
Orientation:forward strand
Alignment:SWBTGTTTRC--
---TGTTTATTT

MA0481.1_FOXP1/Jaspar

Match Rank:8
Score:0.90
Offset:0
Orientation:reverse strand
Alignment:SWBTGTTTRC-----
CTTTGTTTACTTTTN

PB0017.1_Foxj3_1/Jaspar

Match Rank:9
Score:0.89
Offset:-2
Orientation:reverse strand
Alignment:--SWBTGTTTRC-----
NNNTTTGTTTACNTTNN

MA0030.1_FOXF2/Jaspar

Match Rank:10
Score:0.89
Offset:1
Orientation:reverse strand
Alignment:SWBTGTTTRC-----
-NTTGTTTACGTTNN