Information for motif4


Reverse Opposite:

p-value:1e-107
log p-value:-2.477e+02
Information Content per bp:1.579
Number of Target Sequences with motif946.0
Percentage of Target Sequences with motif24.80%
Number of Background Sequences with motif5414.7
Percentage of Background Sequences with motif11.83%
Average Position of motif in Targets100.3 +/- 51.4bp
Average Position of motif in Background91.2 +/- 57.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.43
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL003.1_GC-box/Jaspar

Match Rank:1
Score:0.92
Offset:0
Orientation:reverse strand
Alignment:NRGCYCCGCCCM--
NAGCCCCGCCCCCN

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:2
Score:0.89
Offset:2
Orientation:reverse strand
Alignment:NRGCYCCGCCCM
--GCCMCRCCCH

MA0599.1_KLF5/Jaspar

Match Rank:3
Score:0.89
Offset:2
Orientation:forward strand
Alignment:NRGCYCCGCCCM
--GCCCCGCCCC

MA0079.3_SP1/Jaspar

Match Rank:4
Score:0.88
Offset:2
Orientation:forward strand
Alignment:NRGCYCCGCCCM-
--GCCCCGCCCCC

MA0039.2_Klf4/Jaspar

Match Rank:5
Score:0.87
Offset:2
Orientation:reverse strand
Alignment:NRGCYCCGCCCM
--GCCCCACCCA

PB0039.1_Klf7_1/Jaspar

Match Rank:6
Score:0.87
Offset:-1
Orientation:forward strand
Alignment:-NRGCYCCGCCCM---
TCGACCCCGCCCCTAT

Sp1(Zf)/Promoter/Homer

Match Rank:7
Score:0.86
Offset:1
Orientation:forward strand
Alignment:NRGCYCCGCCCM-
-GGCCCCGCCCCC

MA0516.1_SP2/Jaspar

Match Rank:8
Score:0.85
Offset:2
Orientation:forward strand
Alignment:NRGCYCCGCCCM-----
--GCCCCGCCCCCTCCC

MA0493.1_Klf1/Jaspar

Match Rank:9
Score:0.82
Offset:1
Orientation:forward strand
Alignment:NRGCYCCGCCCM
-GGCCACACCCA

PB0180.1_Sp4_2/Jaspar

Match Rank:10
Score:0.80
Offset:-1
Orientation:reverse strand
Alignment:-NRGCYCCGCCCM--
NNGGCCACGCCTTTN