Information for motif1


Reverse Opposite:

p-value:1e-446
log p-value:-1.027e+03
Information Content per bp:1.886
Number of Target Sequences with motif503.0
Percentage of Target Sequences with motif9.14%
Number of Background Sequences with motif17.0
Percentage of Background Sequences with motif0.51%
Average Position of motif in Targets102.1 +/- 52.4bp
Average Position of motif in Background116.2 +/- 60.9bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.22
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Sp1(Zf)/Promoter/Homer

Match Rank:1
Score:0.94
Offset:0
Orientation:forward strand
Alignment:GGCCCCGCCC--
GGCCCCGCCCCC

POL003.1_GC-box/Jaspar

Match Rank:2
Score:0.88
Offset:-1
Orientation:reverse strand
Alignment:-GGCCCCGCCC---
NAGCCCCGCCCCCN

MA0599.1_KLF5/Jaspar

Match Rank:3
Score:0.87
Offset:1
Orientation:forward strand
Alignment:GGCCCCGCCC-
-GCCCCGCCCC

PB0039.1_Klf7_1/Jaspar

Match Rank:4
Score:0.86
Offset:-2
Orientation:forward strand
Alignment:--GGCCCCGCCC----
TCGACCCCGCCCCTAT

MA0079.3_SP1/Jaspar

Match Rank:5
Score:0.85
Offset:1
Orientation:forward strand
Alignment:GGCCCCGCCC--
-GCCCCGCCCCC

MA0039.2_Klf4/Jaspar

Match Rank:6
Score:0.85
Offset:1
Orientation:reverse strand
Alignment:GGCCCCGCCC-
-GCCCCACCCA

MA0516.1_SP2/Jaspar

Match Rank:7
Score:0.84
Offset:1
Orientation:forward strand
Alignment:GGCCCCGCCC------
-GCCCCGCCCCCTCCC

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:8
Score:0.84
Offset:1
Orientation:reverse strand
Alignment:GGCCCCGCCC-
-GCCMCRCCCH

POL011.1_XCPE1/Jaspar

Match Rank:9
Score:0.83
Offset:0
Orientation:reverse strand
Alignment:GGCCCCGCCC
GGTCCCGCCC

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.78
Offset:2
Orientation:reverse strand
Alignment:GGCCCCGCCC
--CCCCCCCC