Information for motif20


Reverse Opposite:

p-value:1e-65
log p-value:-1.510e+02
Information Content per bp:1.709
Number of Target Sequences with motif121.0
Percentage of Target Sequences with motif2.20%
Number of Background Sequences with motif9.8
Percentage of Background Sequences with motif0.29%
Average Position of motif in Targets106.3 +/- 57.1bp
Average Position of motif in Background101.4 +/- 32.4bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0151.1_Myf6_2/Jaspar

Match Rank:1
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---CAAAGCCGCGCC
AGCAACAGCCGCACC

POL003.1_GC-box/Jaspar

Match Rank:2
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:CAAAGCCGCGCC----
--NAGCCCCGCCCCCN

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:3
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:CAAAGCCGCGCC--
----GCCMCRCCCH

MA0039.2_Klf4/Jaspar

Match Rank:4
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:CAAAGCCGCGCC--
----GCCCCACCCA

PB0008.1_E2F2_1/Jaspar

Match Rank:5
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CAAAGCCGCGCC--
ATAAAGGCGCGCGAT

PB0009.1_E2F3_1/Jaspar

Match Rank:6
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CAAAGCCGCGCC--
ATAAGGGCGCGCGAT

Sp1(Zf)/Promoter/Homer

Match Rank:7
Score:0.62
Offset:3
Orientation:forward strand
Alignment:CAAAGCCGCGCC---
---GGCCCCGCCCCC

PB0180.1_Sp4_2/Jaspar

Match Rank:8
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CAAAGCCGCGCC----
-NNGGCCACGCCTTTN

MA0599.1_KLF5/Jaspar

Match Rank:9
Score:0.60
Offset:4
Orientation:forward strand
Alignment:CAAAGCCGCGCC--
----GCCCCGCCCC

POL006.1_BREu/Jaspar

Match Rank:10
Score:0.58
Offset:4
Orientation:forward strand
Alignment:CAAAGCCGCGCC
----AGCGCGCC