Information for motif23


Reverse Opposite:

p-value:1e-60
log p-value:-1.397e+02
Information Content per bp:1.897
Number of Target Sequences with motif98.0
Percentage of Target Sequences with motif1.78%
Number of Background Sequences with motif6.5
Percentage of Background Sequences with motif0.20%
Average Position of motif in Targets104.1 +/- 54.4bp
Average Position of motif in Background118.4 +/- 54.4bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0143.1_Klf7_2/Jaspar

Match Rank:1
Score:0.67
Offset:-5
Orientation:forward strand
Alignment:-----TGCGACCC----
AAGCATACGCCCAACTT

PH0067.1_Hoxc12/Jaspar

Match Rank:2
Score:0.64
Offset:-7
Orientation:reverse strand
Alignment:-------TGCGACCC--
GNNNTTTTACGACCTNA

PB0025.1_Glis2_1/Jaspar

Match Rank:3
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TGCGACCC-------
TATCGACCCCCCACAG

PB0076.1_Sp4_1/Jaspar

Match Rank:4
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---TGCGACCC------
GGTCCCGCCCCCTTCTC

PB0027.1_Gmeb1_1/Jaspar

Match Rank:5
Score:0.61
Offset:-6
Orientation:reverse strand
Alignment:------TGCGACCC---
NNNTNGTACGTAANNNN

PB0029.1_Hic1_1/Jaspar

Match Rank:6
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----TGCGACCC----
ACTATGCCAACCTACC

PB0153.1_Nr2f2_2/Jaspar

Match Rank:7
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TGCGACCC------
NNNNTGACCCGGCGCG

PH0077.1_Hoxd12/Jaspar

Match Rank:8
Score:0.59
Offset:-7
Orientation:reverse strand
Alignment:-------TGCGACCC--
NNNATTTTACGACNNTN

PB0094.1_Zfp128_1/Jaspar

Match Rank:9
Score:0.59
Offset:-6
Orientation:reverse strand
Alignment:------TGCGACCC---
TTNGGGTACGCCNNANN

PB0202.1_Zfp410_2/Jaspar

Match Rank:10
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----TGCGACCC-----
TCACCCCGCCCCAAATT