Information for motif24


Reverse Opposite:

p-value:1e-57
log p-value:-1.325e+02
Information Content per bp:1.890
Number of Target Sequences with motif290.0
Percentage of Target Sequences with motif5.27%
Number of Background Sequences with motif58.1
Percentage of Background Sequences with motif1.75%
Average Position of motif in Targets91.2 +/- 51.9bp
Average Position of motif in Background86.2 +/- 38.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:1
Score:0.75
Offset:3
Orientation:reverse strand
Alignment:YGTTGACC-
---TGACCT

PB0030.1_Hnf4a_1/Jaspar

Match Rank:2
Score:0.75
Offset:-2
Orientation:reverse strand
Alignment:--YGTTGACC-------
NNANTTGACCCCTNNNN

MA0071.1_RORA_1/Jaspar

Match Rank:3
Score:0.70
Offset:3
Orientation:reverse strand
Alignment:YGTTGACC-----
---TGACCTTGAT

PB0057.1_Rxra_1/Jaspar

Match Rank:4
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--YGTTGACC-------
TGTCGTGACCCCTTAAT

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan et al.)/Homer

Match Rank:5
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-YGTTGACC
CTGTTTAC-

PB0118.1_Esrra_2/Jaspar

Match Rank:6
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--YGTTGACC-------
NNNNTTGACCCCTNNNN

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:7
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--YGTTGACC--
CNTGTTTACATA

PB0049.1_Nr2f2_1/Jaspar

Match Rank:8
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-YGTTGACC-------
NNNNTGACCTTTNNNN

PB0153.1_Nr2f2_2/Jaspar

Match Rank:9
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-YGTTGACC-------
NNNNTGACCCGGCGCG

PB0157.1_Rara_2/Jaspar

Match Rank:10
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-YGTTGACC-------
NNCNTGACCCCGCTCT