Information for motif25


Reverse Opposite:

p-value:1e-54
log p-value:-1.249e+02
Information Content per bp:1.929
Number of Target Sequences with motif103.0
Percentage of Target Sequences with motif1.87%
Number of Background Sequences with motif8.9
Percentage of Background Sequences with motif0.27%
Average Position of motif in Targets106.0 +/- 53.5bp
Average Position of motif in Background79.7 +/- 40.1bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0180.1_Sp4_2/Jaspar

Match Rank:1
Score:0.65
Offset:-6
Orientation:reverse strand
Alignment:------CCGCCTTG-
NNGGCCACGCCTTTN

PB0164.1_Smad3_2/Jaspar

Match Rank:2
Score:0.63
Offset:-6
Orientation:forward strand
Alignment:------CCGCCTTG---
TACGCCCCGCCACTCTG

MA0516.1_SP2/Jaspar

Match Rank:3
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CCGCCTTG----
GCCCCGCCCCCTCCC

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----CCGCCTTG
DTTTCCCGCC---

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:5
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---CCGCCTTG
TTCCCGCCWG-

MA0471.1_E2F6/Jaspar

Match Rank:6
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----CCGCCTTG
NCTTCCCGCCC--

MA0470.1_E2F4/Jaspar

Match Rank:7
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----CCGCCTTG
NNTTCCCGCCC--

YY1(Zf)/Promoter/Homer

Match Rank:8
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CCGCCTTG---
GCCGCCATCTTG

MA0024.2_E2F1/Jaspar

Match Rank:9
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----CCGCCTTG
CCTCCCGCCCN-

PB0008.1_E2F2_1/Jaspar

Match Rank:10
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----CCGCCTTG--
NTCGCGCGCCTTNNN