Information for motif27


Reverse Opposite:

p-value:1e-47
log p-value:-1.085e+02
Information Content per bp:1.599
Number of Target Sequences with motif114.0
Percentage of Target Sequences with motif2.07%
Number of Background Sequences with motif12.3
Percentage of Background Sequences with motif0.37%
Average Position of motif in Targets96.7 +/- 53.9bp
Average Position of motif in Background144.3 +/- 44.4bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL010.1_DCE_S_III/Jaspar

Match Rank:1
Score:0.59
Offset:4
Orientation:forward strand
Alignment:CGCCGAGCCGAA
----CAGCC---

POL013.1_MED-1/Jaspar

Match Rank:2
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CGCCGAGCCGAA
--CGGAGC----

POL006.1_BREu/Jaspar

Match Rank:3
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CGCCGAGCCGAA
-AGCGCGCC---

PB0113.1_E2F3_2/Jaspar

Match Rank:4
Score:0.52
Offset:-8
Orientation:reverse strand
Alignment:--------CGCCGAGCCGAA
NNNNTTGGCGCCGANNN---

PB0199.1_Zfp161_2/Jaspar

Match Rank:5
Score:0.52
Offset:-4
Orientation:forward strand
Alignment:----CGCCGAGCCGAA
GCCGCGCAGTGCGT--

PB0202.1_Zfp410_2/Jaspar

Match Rank:6
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---CGCCGAGCCGAA--
TCACCCCGCCCCAAATT

MA0117.1_Mafb/Jaspar

Match Rank:7
Score:0.50
Offset:6
Orientation:forward strand
Alignment:CGCCGAGCCGAA--
------GCTGACGC

POL001.1_MTE/Jaspar

Match Rank:8
Score:0.50
Offset:0
Orientation:forward strand
Alignment:CGCCGAGCCGAA-------
TTTCGAGCGGAACGGTCGC

PB0112.1_E2F2_2/Jaspar

Match Rank:9
Score:0.49
Offset:-8
Orientation:reverse strand
Alignment:--------CGCCGAGCCGAA
NNNNTTGGCGCCGANNN---

PB0205.1_Zic1_2/Jaspar

Match Rank:10
Score:0.48
Offset:-1
Orientation:forward strand
Alignment:-CGCCGAGCCGAA--
CCACACAGCAGGAGA