Information for motif28


Reverse Opposite:

p-value:1e-44
log p-value:-1.029e+02
Information Content per bp:1.530
Number of Target Sequences with motif54.0
Percentage of Target Sequences with motif0.98%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets110.5 +/- 51.0bp
Average Position of motif in Background90.9 +/- 24.9bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:1
Score:0.66
Offset:-5
Orientation:forward strand
Alignment:-----CTGGTGCGAT--
ATCCACAGGTGCGAAAA

Srebp1a(HLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:CTGGTGCGAT
ATGGGGTGAT

MA0596.1_SREBF2/Jaspar

Match Rank:3
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CTGGTGCGAT
ATGGGGTGAT

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:4
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CTGGTGCGAT
MTGATGCAAT

MA0466.1_CEBPB/Jaspar

Match Rank:5
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CTGGTGCGAT-
ATTGTGCAATA

MA0103.2_ZEB1/Jaspar

Match Rank:6
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CTGGTGCGAT
CAGGTGAGG-

E2A-nearPU.1(HLH)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CTGGTGCGAT
NNCAGGTGNN--

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:8
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CTGGTGCGAT
ATGATGCAAT

MA0595.1_SREBF1/Jaspar

Match Rank:9
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CTGGTGCGAT
GTGGGGTGAT

Srebp2(HLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CTGGTGCGAT--
GTGGCGTGACNG