Information for motif3


Reverse Opposite:

p-value:1e-255
log p-value:-5.872e+02
Information Content per bp:1.857
Number of Target Sequences with motif162.0
Percentage of Target Sequences with motif2.94%
Number of Background Sequences with motif0.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets99.4 +/- 53.6bp
Average Position of motif in Background56.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0506.1_NRF1/Jaspar

Match Rank:1
Score:0.88
Offset:-1
Orientation:reverse strand
Alignment:-ACGCAGGCGC
TGCGCAGGCGC

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.83
Offset:0
Orientation:reverse strand
Alignment:ACGCAGGCGC--
GCGCATGCGCAG

NRF1/Promoter/Homer

Match Rank:3
Score:0.81
Offset:-2
Orientation:forward strand
Alignment:--ACGCAGGCGC
GTGCGCATGCGC

POL006.1_BREu/Jaspar

Match Rank:4
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:ACGCAGGCGC---
-----GGCGCGCT

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:5
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--ACGCAGGCGC-----
ATCCACAGGTGCGAAAA

PB0008.1_E2F2_1/Jaspar

Match Rank:6
Score:0.59
Offset:0
Orientation:forward strand
Alignment:ACGCAGGCGC-----
ATAAAGGCGCGCGAT

E2A-nearPU.1(HLH)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:ACGCAGGCGC-
-NNCAGGTGNN

MA0048.1_NHLH1/Jaspar

Match Rank:8
Score:0.58
Offset:0
Orientation:forward strand
Alignment:ACGCAGGCGC--
GCGCAGCTGCGT

PB0095.1_Zfp161_1/Jaspar

Match Rank:9
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----ACGCAGGCGC--
NCANGCGCGCGCGCCA

PB0009.1_E2F3_1/Jaspar

Match Rank:10
Score:0.57
Offset:0
Orientation:forward strand
Alignment:ACGCAGGCGC-----
ATAAGGGCGCGCGAT