Information for motif4


Reverse Opposite:

p-value:1e-251
log p-value:-5.780e+02
Information Content per bp:1.715
Number of Target Sequences with motif160.0
Percentage of Target Sequences with motif2.91%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets100.2 +/- 57.1bp
Average Position of motif in Background88.0 +/- 11.2bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0524.1_TFAP2C/Jaspar

Match Rank:1
Score:0.67
Offset:-5
Orientation:forward strand
Alignment:-----CCGCGGGCCG
CATGGCCCCAGGGCA

ZNF711(Zf)/SH-SY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:2
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:CCGCGGGCCG
--CTAGGCCT

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:3
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CCGCGGGCCG-
SCCTSAGGSCAW

MA0003.2_TFAP2A/Jaspar

Match Rank:4
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----CCGCGGGCCG
CATTGCCTCAGGGCA

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:5
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----CCGCGGGCCG-
NTNGCCTCAGGCNNN

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CCGCGGGCCG-
GCCTCAGGGCAT

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:7
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---CCGCGGGCCG-
TCACCTCTGGGCAG

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CCGCGGGCCG
--CNAGGCCT

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:9
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----CCGCGGGCCG-
NTCCCCTCAGGGANT

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:10
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----CCGCGGGCCG-
NTCGCCTCAGGCAAT