Information for motif6


Reverse Opposite:

p-value:1e-136
log p-value:-3.154e+02
Information Content per bp:1.671
Number of Target Sequences with motif100.0
Percentage of Target Sequences with motif1.82%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets95.4 +/- 54.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0597.1_THAP1/Jaspar

Match Rank:1
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GCCCGGACGG
CTGCCCGCA---

PB0010.1_Egr1_1/Jaspar

Match Rank:2
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GCCCGGACGG-
ANTGCGGGGGCGGN

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----GCCCGGACGG
ACATGCCCGGGCAT

MA0146.2_Zfx/Jaspar

Match Rank:4
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---GCCCGGACGG-
CAGGCCNNGGCCNN

MA0003.2_TFAP2A/Jaspar

Match Rank:5
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GCCCGGACGG----
TGCCCTGAGGCANTN

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GCCCGGACGG
ATGCCCTGAGGC

PB0086.1_Tcfap2b_1/Jaspar

Match Rank:7
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GCCCGGACGG--
TTGCCCTAGGGCAT

PB0103.1_Zic3_1/Jaspar

Match Rank:8
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---GCCCGGACGG--
CCCCCCCGGGGGGGT

PB0101.1_Zic1_1/Jaspar

Match Rank:9
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---GCCCGGACGG-
CACCCCCGGGGGGG

Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GCCCGGACGG
TTCCNGGAAG-