Information for motif8


Reverse Opposite:

p-value:1e-127
log p-value:-2.937e+02
Information Content per bp:1.681
Number of Target Sequences with motif127.0
Percentage of Target Sequences with motif2.31%
Number of Background Sequences with motif3.3
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets101.0 +/- 50.4bp
Average Position of motif in Background122.9 +/- 22.7bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.87
Offset:-7
Orientation:forward strand
Alignment:-------GCCACCTGGTGG-
CNNBRGCGCCCCCTGSTGGC

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski et al.)/Homer

Match Rank:2
Score:0.86
Offset:-5
Orientation:forward strand
Alignment:-----GCCACCTGGTGG---
ANAGTGCCACCTGGTGGCCA

MA0139.1_CTCF/Jaspar

Match Rank:3
Score:0.86
Offset:-4
Orientation:reverse strand
Alignment:----GCCACCTGGTGG---
TAGCGCCCCCTGGTGGCCA

PB0101.1_Zic1_1/Jaspar

Match Rank:4
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GCCACCTGGTGG-
CACCCCCGGGGGGG

PB0103.1_Zic3_1/Jaspar

Match Rank:5
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GCCACCTGGTGG--
CCCCCCCGGGGGGGT

PB0102.1_Zic2_1/Jaspar

Match Rank:6
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GCCACCTGGTGG--
CCCCCCCGGGGGGGT

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:7
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GCCACCTGGTGG
GCCATCTGTT--

MA0461.1_Atoh1/Jaspar

Match Rank:8
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GCCACCTGGTGG
GCCATCTG----

Unknown-ESC-element/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:9
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GCCACCTGGTGG-
-CCCCCTGCTGTG

E2A-nearPU.1(HLH)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:GCCACCTGGTGG-
---NNCAGGTGNN