Information for motif9


Reverse Opposite:

p-value:1e-119
log p-value:-2.747e+02
Information Content per bp:1.511
Number of Target Sequences with motif90.0
Percentage of Target Sequences with motif1.64%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets95.2 +/- 51.5bp
Average Position of motif in Background136.6 +/- 36.6bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

NFY(CCAAT)/Promoter/Homer

Match Rank:1
Score:0.73
Offset:0
Orientation:forward strand
Alignment:GGCCAATCGCGG
AGCCAATCGG--

POL004.1_CCAAT-box/Jaspar

Match Rank:2
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---GGCCAATCGCGG
ACTAGCCAATCA---

MA0161.1_NFIC/Jaspar

Match Rank:3
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GGCCAATCGCGG
TGCCAA------

MA0502.1_NFYB/Jaspar

Match Rank:4
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----GGCCAATCGCGG
AAATGGACCAATCAG--

MA0163.1_PLAG1/Jaspar

Match Rank:5
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GGCCAATCGCGG
GGGGCCCAAGGGGG

ZNF711(Zf)/SH-SY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:6
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GGCCAATCGCGG
AGGCCTAG-----

PB0140.1_Irf6_2/Jaspar

Match Rank:7
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GGCCAATCGCGG----
-ACCACTCTCGGTCAC

TRa(NR)/C17.2-TRa-ChIP-Seq(GSE38347)/Homer

Match Rank:8
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GGCCAATCGCGG---
GGTCANYTGAGGWCA

MA0146.2_Zfx/Jaspar

Match Rank:9
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--GGCCAATCGCGG
CAGGCCNNGGCCNN

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:10
Score:0.54
Offset:3
Orientation:forward strand
Alignment:GGCCAATCGCGG-
---AAATCACTGC