Information for motif19


Reverse Opposite:

p-value:1e-13
log p-value:-3.102e+01
Information Content per bp:1.460
Number of Target Sequences with motif194.0
Percentage of Target Sequences with motif3.52%
Number of Background Sequences with motif862.8
Percentage of Background Sequences with motif1.96%
Average Position of motif in Targets101.9 +/- 55.8bp
Average Position of motif in Background100.3 +/- 57.3bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0024.1_Dlx5/Jaspar

Match Rank:1
Score:0.66
Offset:-6
Orientation:reverse strand
Alignment:------BAAWGRCCBC
NANNGNTAATTACCNN

PB0031.1_Hoxa3_1/Jaspar

Match Rank:2
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--BAAWGRCCBC--
GTTAATTANCTCNN

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:3
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--BAAWGRCCBC
GKTAATGR----

PH0009.1_Bsx/Jaspar

Match Rank:4
Score:0.61
Offset:-6
Orientation:reverse strand
Alignment:------BAAWGRCCBC
NTNAGNTAATTACCTN

PH0020.1_Dlx1/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--BAAWGRCCBC--
ATTAATTANCTCAN

PH0103.1_Meox1/Jaspar

Match Rank:6
Score:0.61
Offset:-6
Orientation:reverse strand
Alignment:------BAAWGRCCBC
CTGAGGTAATTACCNC

PH0073.1_Hoxc9/Jaspar

Match Rank:7
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----BAAWGRCCBC-
NNAATTAATGACCNNN

PH0050.1_Hoxa3/Jaspar

Match Rank:8
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--BAAWGRCCBC--
ACTAATTANCNCNA

PH0021.1_Dlx2/Jaspar

Match Rank:9
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----BAAWGRCCBC--
GGAATAATTACCTCAG

PH0061.1_Hoxb6/Jaspar

Match Rank:10
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------BAAWGRCCBC
TATTGGTAATTACCTT