Information for motif23


Reverse Opposite:

p-value:1e-6
log p-value:-1.477e+01
Information Content per bp:1.530
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif0.16%
Number of Background Sequences with motif7.1
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets103.1 +/- 50.0bp
Average Position of motif in Background111.0 +/- 89.0bp
Strand Bias (log2 ratio + to - strand density)1.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0175.1_Sox4_2/Jaspar

Match Rank:1
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--AAGAATTGCT-----
GGAAAAATTGTTAGGAA

PB0146.1_Mafk_2/Jaspar

Match Rank:2
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--AAGAATTGCT---
GAAAAAATTGCAAGG

PB0165.1_Sox11_2/Jaspar

Match Rank:3
Score:0.65
Offset:1
Orientation:forward strand
Alignment:AAGAATTGCT-----
-AAAATTGTTATGAA

PH0041.1_Hmx1/Jaspar

Match Rank:4
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----AAGAATTGCT---
ANNCATTAATTGCTNGN

PB0066.1_Sox17_1/Jaspar

Match Rank:5
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---AAGAATTGCT--
ATAAACAATTAAACA

PB0173.1_Sox21_2/Jaspar

Match Rank:6
Score:0.62
Offset:-6
Orientation:reverse strand
Alignment:------AAGAATTGCT-
NNNNNGAACAATTGANN

MF0010.1_Homeobox_class/Jaspar

Match Rank:7
Score:0.62
Offset:0
Orientation:forward strand
Alignment:AAGAATTGCT
AATAATT---

PB0074.1_Sox8_1/Jaspar

Match Rank:8
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----AAGAATTGCT--
TNNAGAACAATANATNN

PH0007.1_Barx1/Jaspar

Match Rank:9
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----AAGAATTGCT--
ATNNACTAATTACTTT

PH0043.1_Hmx3/Jaspar

Match Rank:10
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----AAGAATTGCT---
ATTNNTTAATTGCTTGT