Information for motif6


Reverse Opposite:

p-value:1e-58
log p-value:-1.355e+02
Information Content per bp:1.634
Number of Target Sequences with motif1325.0
Percentage of Target Sequences with motif24.03%
Number of Background Sequences with motif6857.8
Percentage of Background Sequences with motif15.59%
Average Position of motif in Targets100.1 +/- 54.9bp
Average Position of motif in Background99.2 +/- 58.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:1
Score:0.95
Offset:0
Orientation:reverse strand
Alignment:AGGTGTKAAR
AGGTGTTAAT

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:2
Score:0.95
Offset:0
Orientation:forward strand
Alignment:AGGTGTKAAR
AGGTGTGAAM

PB0013.1_Eomes_1/Jaspar

Match Rank:3
Score:0.91
Offset:-4
Orientation:forward strand
Alignment:----AGGTGTKAAR---
GAAAAGGTGTGAAAATT

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:4
Score:0.89
Offset:0
Orientation:forward strand
Alignment:AGGTGTKAAR
AGGTGTCA--

MA0009.1_T/Jaspar

Match Rank:5
Score:0.88
Offset:-2
Orientation:forward strand
Alignment:--AGGTGTKAAR
CTAGGTGTGAA-

PH0164.1_Six4/Jaspar

Match Rank:6
Score:0.71
Offset:-4
Orientation:reverse strand
Alignment:----AGGTGTKAAR---
TNNNNGGTGTCATNTNT

E2A-nearPU.1(HLH)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---AGGTGTKAAR
NNCAGGTGNN---

PH0157.1_Rhox11_1/Jaspar

Match Rank:8
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----AGGTGTKAAR---
AAGACGCTGTAAAGCGA

PH0158.1_Rhox11_2/Jaspar

Match Rank:9
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----AGGTGTKAAR---
AGGACGCTGTAAAGGGA

PH0170.1_Tgif2/Jaspar

Match Rank:10
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----AGGTGTKAAR--
AACTAGCTGTCAATAC