Information for motif7


Reverse Opposite:

p-value:1e-45
log p-value:-1.038e+02
Information Content per bp:1.675
Number of Target Sequences with motif496.0
Percentage of Target Sequences with motif9.00%
Number of Background Sequences with motif1988.7
Percentage of Background Sequences with motif4.52%
Average Position of motif in Targets102.1 +/- 55.0bp
Average Position of motif in Background99.7 +/- 57.7bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0205.1_Zic1_2/Jaspar

Match Rank:1
Score:0.91
Offset:-3
Orientation:reverse strand
Alignment:---CCTGCTGDGANV
TNTCCTGCTGTGNNG

Unknown-ESC-element/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:2
Score:0.91
Offset:-3
Orientation:reverse strand
Alignment:---CCTGCTGDGANV
CCCCCTGCTGTG---

PB0206.1_Zic2_2/Jaspar

Match Rank:3
Score:0.91
Offset:-3
Orientation:reverse strand
Alignment:---CCTGCTGDGANV
TCNCCTGCTGNGNNN

PB0207.1_Zic3_2/Jaspar

Match Rank:4
Score:0.89
Offset:-3
Orientation:reverse strand
Alignment:---CCTGCTGDGANV
NNTCCTGCTGTGNNN

MA0461.1_Atoh1/Jaspar

Match Rank:5
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-CCTGCTGDGANV
GCCATCTG-----

Ap4(HLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:6
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--CCTGCTGDGANV
NAHCAGCTGD----

SCL(HLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:7
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-CCTGCTGDGANV
ANCAGCTG-----

Tcf12(HLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--CCTGCTGDGANV
CAGCAGCTGN----

MA0522.1_Tcf3/Jaspar

Match Rank:9
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--CCTGCTGDGANV
NTGCAGCTGTG---

E2A(HLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:10
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:CCTGCTGDGANV
GCAGCTGTNN--