Information for motif14


Reverse Opposite:

p-value:1e-103
log p-value:-2.380e+02
Information Content per bp:1.934
Number of Target Sequences with motif129.0
Percentage of Target Sequences with motif3.38%
Number of Background Sequences with motif5.7
Percentage of Background Sequences with motif0.25%
Average Position of motif in Targets107.5 +/- 50.4bp
Average Position of motif in Background97.7 +/- 52.1bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

NFY(CCAAT)/Promoter/Homer

Match Rank:1
Score:0.90
Offset:-2
Orientation:reverse strand
Alignment:--GATTGGCT
CCGATTGGCT

POL004.1_CCAAT-box/Jaspar

Match Rank:2
Score:0.88
Offset:-1
Orientation:reverse strand
Alignment:-GATTGGCT---
TGATTGGCTANN

MA0502.1_NFYB/Jaspar

Match Rank:3
Score:0.84
Offset:-2
Orientation:reverse strand
Alignment:--GATTGGCT-----
CTGATTGGTCNATTT

MA0161.1_NFIC/Jaspar

Match Rank:4
Score:0.77
Offset:2
Orientation:forward strand
Alignment:GATTGGCT
--TTGGCA

MA0060.2_NFYA/Jaspar

Match Rank:5
Score:0.76
Offset:-8
Orientation:forward strand
Alignment:--------GATTGGCT--
AGAGTGCTGATTGGTCCA

PH0026.1_Duxbl/Jaspar

Match Rank:6
Score:0.72
Offset:-7
Orientation:reverse strand
Alignment:-------GATTGGCT--
NNNNGTTGATTGGGTCG

MA0038.1_Gfi1/Jaspar

Match Rank:7
Score:0.71
Offset:-4
Orientation:reverse strand
Alignment:----GATTGGCT
CNGTGATTTN--

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:8
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GATTGGCT
GGATTAGC-

PH0139.1_Pitx3/Jaspar

Match Rank:9
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----GATTGGCT---
AGGGGGATTAGCTGCC

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GATTGGCT--
NTGATTGACAGN