Information for motif19


Reverse Opposite:

p-value:1e-82
log p-value:-1.895e+02
Information Content per bp:1.382
Number of Target Sequences with motif68.0
Percentage of Target Sequences with motif1.78%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets111.1 +/- 58.1bp
Average Position of motif in Background182.4 +/- 1.9bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0179.1_Sp100_2/Jaspar

Match Rank:1
Score:0.79
Offset:0
Orientation:forward strand
Alignment:RGCGTCGCBN-----
TCCGTCGCTTAAAAG

PB0131.1_Gmeb1_2/Jaspar

Match Rank:2
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--RGCGTCGCBN----
TGGGCGACGTCGTTAA

MA0067.1_Pax2/Jaspar

Match Rank:3
Score:0.59
Offset:2
Orientation:forward strand
Alignment:RGCGTCGCBN
--AGTCACGC

MA0018.2_CREB1/Jaspar

Match Rank:4
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-RGCGTCGCBN
TGACGTCA---

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:5
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:RGCGTCGCBN
-ACGTCA---

PB0117.1_Eomes_2/Jaspar

Match Rank:6
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----RGCGTCGCBN-
GCGGAGGTGTCGCCTC

POL006.1_BREu/Jaspar

Match Rank:7
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:RGCGTCGCBN-
---GGCGCGCT

POL008.1_DCE_S_I/Jaspar

Match Rank:8
Score:0.53
Offset:1
Orientation:forward strand
Alignment:RGCGTCGCBN
-GCTTCC---

PB0112.1_E2F2_2/Jaspar

Match Rank:9
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--RGCGTCGCBN-----
CCTTCGGCGCCAAAAGG

PB0147.1_Max_2/Jaspar

Match Rank:10
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:RGCGTCGCBN-----
-NNGTCGCGTGNCAC