Information for motif20


Reverse Opposite:

p-value:1e-82
log p-value:-1.895e+02
Information Content per bp:1.510
Number of Target Sequences with motif68.0
Percentage of Target Sequences with motif1.78%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets107.7 +/- 49.3bp
Average Position of motif in Background109.1 +/- 36.7bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.86
Offset:-1
Orientation:reverse strand
Alignment:-CGCATGCGCAAT
GCGCATGCGCAG-

MA0506.1_NRF1/Jaspar

Match Rank:2
Score:0.85
Offset:-1
Orientation:forward strand
Alignment:-CGCATGCGCAAT
GCGCCTGCGCA--

NRF1/Promoter/Homer

Match Rank:3
Score:0.85
Offset:-1
Orientation:reverse strand
Alignment:-CGCATGCGCAAT
GCGCATGCGCAC-

CEBP(bZIP)/CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CGCATGCGCAAT
--GTTGCGCAAT

PB0044.1_Mtf1_1/Jaspar

Match Rank:5
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CGCATGCGCAAT--
GGGCCGTGTGCAAAAA

PB0095.1_Zfp161_1/Jaspar

Match Rank:6
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----CGCATGCGCAAT
NCANGCGCGCGCGCCA-

PB0133.1_Hic1_2/Jaspar

Match Rank:7
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CGCATGCGCAAT---
GGGTGTGCCCAAAAGG

PB0010.1_Egr1_1/Jaspar

Match Rank:8
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--CGCATGCGCAAT
TCCGCCCCCGCATT

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:9
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---CGCATGCGCAAT--
ATCCACAGGTGCGAAAA

MA0006.1_Arnt::Ahr/Jaspar

Match Rank:10
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:CGCATGCGCAAT
--CACGCA----