Information for motif21


Reverse Opposite:

p-value:1e-77
log p-value:-1.784e+02
Information Content per bp:1.825
Number of Target Sequences with motif65.0
Percentage of Target Sequences with motif1.70%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets99.0 +/- 56.5bp
Average Position of motif in Background125.9 +/- 14.5bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:1
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--TTCCGAGGCG
HTTTCCCASG--

MA0154.2_EBF1/Jaspar

Match Rank:2
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TTCCGAGGCG--
-TCCCTGGGGAN

PB0115.1_Ehf_2/Jaspar

Match Rank:3
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------TTCCGAGGCG
TAGTATTTCCGATCTT

MA0028.1_ELK1/Jaspar

Match Rank:4
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TTCCGAGGCG
CTTCCGGNNN-

Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---TTCCGAGGCG
NRYTTCCGGY---

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:6
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---TTCCGAGGCG--
ATTGCCTGAGGCAAT

Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---TTCCGAGGCG
HACTTCCGGY---

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TTCCGAGGCG-
GTCCCCAGGGGA

ZNF711(Zf)/SH-SY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:9
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:TTCCGAGGCG-
---CTAGGCCT

PH0048.1_Hoxa13/Jaspar

Match Rank:10
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----TTCCGAGGCG-
ANATTTTACGAGNNNN