Information for motif22


Reverse Opposite:

p-value:1e-70
log p-value:-1.625e+02
Information Content per bp:1.838
Number of Target Sequences with motif74.0
Percentage of Target Sequences with motif1.94%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets97.5 +/- 54.1bp
Average Position of motif in Background93.5 +/- 34.9bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0131.1_HINFP/Jaspar

Match Rank:1
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-AGCGTTCG-
TAACGTCCGC

PB0094.1_Zfp128_1/Jaspar

Match Rank:2
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--AGCGTTCG-------
TTNGGGTACGCCNNANN

POL010.1_DCE_S_III/Jaspar

Match Rank:3
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-AGCGTTCG
CAGCC----

PB0194.1_Zbtb12_2/Jaspar

Match Rank:4
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:AGCGTTCG-------
AGNGTTCTAATGANN

PB0173.1_Sox21_2/Jaspar

Match Rank:5
Score:0.52
Offset:-5
Orientation:forward strand
Alignment:-----AGCGTTCG----
AATCAATTGTTCCGCTA

PB0099.1_Zfp691_1/Jaspar

Match Rank:6
Score:0.52
Offset:-5
Orientation:forward strand
Alignment:-----AGCGTTCG----
CGAACAGTGCTCACTAT

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:7
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--AGCGTTCG
NTATYGATCH

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:8
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---AGCGTTCG
TTGAGTGSTT-

MA0028.1_ELK1/Jaspar

Match Rank:9
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:AGCGTTCG----
--CTTCCGGNNN

PB0072.1_Sox5_1/Jaspar

Match Rank:10
Score:0.50
Offset:-5
Orientation:reverse strand
Alignment:-----AGCGTTCG---
NNTTTATTGTTCTNNN