Information for motif25


Reverse Opposite:

p-value:1e-65
log p-value:-1.508e+02
Information Content per bp:1.668
Number of Target Sequences with motif185.0
Percentage of Target Sequences with motif4.85%
Number of Background Sequences with motif23.4
Percentage of Background Sequences with motif1.02%
Average Position of motif in Targets100.9 +/- 52.2bp
Average Position of motif in Background98.3 +/- 68.4bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0060.2_NFYA/Jaspar

Match Rank:1
Score:0.79
Offset:-5
Orientation:reverse strand
Alignment:-----CAATCAGCGC---
TGGACCAATCAGCACTCT

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.73
Offset:0
Orientation:forward strand
Alignment:CAATCAGCGC
AAATCACTGC

MA0502.1_NFYB/Jaspar

Match Rank:3
Score:0.73
Offset:-8
Orientation:forward strand
Alignment:--------CAATCAGCGC
AAATGGACCAATCAG---

MA0038.1_Gfi1/Jaspar

Match Rank:4
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-CAATCAGCGC
CAAATCACTG-

MA0483.1_Gfi1b/Jaspar

Match Rank:5
Score:0.67
Offset:0
Orientation:forward strand
Alignment:CAATCAGCGC-
AAATCACAGCA

NFY(CCAAT)/Promoter/Homer

Match Rank:6
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---CAATCAGCGC
AGCCAATCGG---

MA0117.1_Mafb/Jaspar

Match Rank:7
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:CAATCAGCGC
NCGTCAGC--

PH0026.1_Duxbl/Jaspar

Match Rank:8
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----CAATCAGCGC--
CGACCCAATCAACGGTG

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:9
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CAATCAGCGC
TGAGTCAGCA-

MA0070.1_PBX1/Jaspar

Match Rank:10
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----CAATCAGCGC
CCATCAATCAAA--