Information for motif27


Reverse Opposite:

p-value:1e-63
log p-value:-1.470e+02
Information Content per bp:1.530
Number of Target Sequences with motif69.0
Percentage of Target Sequences with motif1.81%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets94.7 +/- 54.8bp
Average Position of motif in Background76.8 +/- 18.7bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0130.1_ZNF354C/Jaspar

Match Rank:1
Score:0.71
Offset:3
Orientation:forward strand
Alignment:CCGCTCCACG
---ATCCAC-

POL013.1_MED-1/Jaspar

Match Rank:2
Score:0.64
Offset:2
Orientation:forward strand
Alignment:CCGCTCCACG
--GCTCCG--

PB0202.1_Zfp410_2/Jaspar

Match Rank:3
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----CCGCTCCACG--
TCACCCCGCCCCAAATT

PB0110.1_Bcl6b_2/Jaspar

Match Rank:4
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----CCGCTCCACG--
ATCCCCGCCCCTAAAA

MA0503.1_Nkx2-5_(var.2)/Jaspar

Match Rank:5
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CCGCTCCACG
AGCCACTCAAG-

MA0259.1_HIF1A::ARNT/Jaspar

Match Rank:6
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:CCGCTCCACG---
-----GCACGTNC

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:7
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CCGCTCCACG
AASCACTCAA--

POL010.1_DCE_S_III/Jaspar

Match Rank:8
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CCGCTCCACG
-NGCTN----

MA0006.1_Arnt::Ahr/Jaspar

Match Rank:9
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:CCGCTCCACG--
------CACGCA

MA0104.3_Mycn/Jaspar

Match Rank:10
Score:0.55
Offset:4
Orientation:forward strand
Alignment:CCGCTCCACG--
----GCCACGTG