Information for motif28


Reverse Opposite:

p-value:1e-60
log p-value:-1.396e+02
Information Content per bp:1.950
Number of Target Sequences with motif76.0
Percentage of Target Sequences with motif1.99%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets94.1 +/- 58.3bp
Average Position of motif in Background93.8 +/- 35.1bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1(Zf)/Promoter/Homer

Match Rank:1
Score:0.82
Offset:-3
Orientation:forward strand
Alignment:---GATGGCGG-
CAAGATGGCGGC

PB0164.1_Smad3_2/Jaspar

Match Rank:2
Score:0.75
Offset:-3
Orientation:reverse strand
Alignment:---GATGGCGG------
NAGANTGGCGGGGNGNA

MA0095.2_YY1/Jaspar

Match Rank:3
Score:0.75
Offset:-3
Orientation:forward strand
Alignment:---GATGGCGG-
CAAGATGGCGGC

MA0461.1_Atoh1/Jaspar

Match Rank:4
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GATGGCGG
CAGATGGC--

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:5
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----GATGGCGG
AACAGATGGC--

MA0516.1_SP2/Jaspar

Match Rank:6
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----GATGGCGG---
GGGNGGGGGCGGGGC

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:7
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GATGGCGG---
-CWGGCGGGAA

MA0469.1_E2F3/Jaspar

Match Rank:8
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----GATGGCGG---
NNGTGNGGGCGGGAG

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:9
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GATGGCGG------
--TGGCGGGAAAHB

MA0470.1_E2F4/Jaspar

Match Rank:10
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GATGGCGG-----
--GGGCGGGAAGG