Information for motif29


Reverse Opposite:

p-value:1e-60
log p-value:-1.388e+02
Information Content per bp:1.530
Number of Target Sequences with motif54.0
Percentage of Target Sequences with motif1.42%
Number of Background Sequences with motif0.9
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets91.1 +/- 52.8bp
Average Position of motif in Background66.9 +/- 37.0bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.19
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

CRE(bZIP)/Promoter/Homer

Match Rank:1
Score:0.79
Offset:-2
Orientation:reverse strand
Alignment:--GACGTCACGC
GTGACGTCACCG

MA0018.2_CREB1/Jaspar

Match Rank:2
Score:0.77
Offset:-1
Orientation:reverse strand
Alignment:-GACGTCACGC
TGACGTCA---

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:3
Score:0.77
Offset:1
Orientation:reverse strand
Alignment:GACGTCACGC
-ACGTCA---

Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-GACGTCACGC
TGACGTCATC-

JunD(bZIP)/K562-JunD-ChIP-Seq/Homer

Match Rank:5
Score:0.73
Offset:-4
Orientation:reverse strand
Alignment:----GACGTCACGC
NGATGACGTCAT--

PB0004.1_Atf1_1/Jaspar

Match Rank:6
Score:0.73
Offset:-5
Orientation:reverse strand
Alignment:-----GACGTCACGC-
NCGATGACGTCATCGN

MA0067.1_Pax2/Jaspar

Match Rank:7
Score:0.73
Offset:2
Orientation:forward strand
Alignment:GACGTCACGC
--AGTCACGC

c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.70
Offset:-4
Orientation:reverse strand
Alignment:----GACGTCACGC
NGATGACGTCAT--

MA0006.1_Arnt::Ahr/Jaspar

Match Rank:9
Score:0.70
Offset:5
Orientation:reverse strand
Alignment:GACGTCACGC-
-----CACGCA

PB0038.1_Jundm2_1/Jaspar

Match Rank:10
Score:0.70
Offset:-5
Orientation:reverse strand
Alignment:-----GACGTCACGC-
NCGATGACGTCATCGN