Information for motif32


Reverse Opposite:

p-value:1e-38
log p-value:-8.863e+01
Information Content per bp:1.926
Number of Target Sequences with motif69.0
Percentage of Target Sequences with motif1.81%
Number of Background Sequences with motif5.2
Percentage of Background Sequences with motif0.23%
Average Position of motif in Targets105.3 +/- 53.6bp
Average Position of motif in Background77.8 +/- 44.5bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL010.1_DCE_S_III/Jaspar

Match Rank:1
Score:0.65
Offset:3
Orientation:forward strand
Alignment:AACGAGCT
---CAGCC

PH0151.1_Pou6f1_1/Jaspar

Match Rank:2
Score:0.61
Offset:-6
Orientation:forward strand
Alignment:------AACGAGCT---
GACGATAATGAGCTTGC

MA0164.1_Nr2e3/Jaspar

Match Rank:3
Score:0.61
Offset:2
Orientation:forward strand
Alignment:AACGAGCT-
--CAAGCTT

PH0152.1_Pou6f1_2/Jaspar

Match Rank:4
Score:0.59
Offset:-6
Orientation:forward strand
Alignment:------AACGAGCT---
AAACATAATGAGGTTGC

Ap4(HLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:5
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AACGAGCT--
NAHCAGCTGD

PH0048.1_Hoxa13/Jaspar

Match Rank:6
Score:0.57
Offset:-6
Orientation:reverse strand
Alignment:------AACGAGCT--
ANATTTTACGAGNNNN

POL013.1_MED-1/Jaspar

Match Rank:7
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:AACGAGCT
-CGGAGC-

PH0044.1_Homez/Jaspar

Match Rank:8
Score:0.57
Offset:-6
Orientation:reverse strand
Alignment:------AACGAGCT---
NNTAAAAACGATGTTNT

HIF2a(HLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:9
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---AACGAGCT
GGGTACGTGC-

PH0040.1_Hmbox1/Jaspar

Match Rank:10
Score:0.57
Offset:-6
Orientation:reverse strand
Alignment:------AACGAGCT---
GANGTTAACTAGTTTNN