Information for motif4


Reverse Opposite:

p-value:1e-143
log p-value:-3.299e+02
Information Content per bp:1.667
Number of Target Sequences with motif150.0
Percentage of Target Sequences with motif3.93%
Number of Background Sequences with motif4.4
Percentage of Background Sequences with motif0.19%
Average Position of motif in Targets100.8 +/- 54.3bp
Average Position of motif in Background97.6 +/- 36.9bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL011.1_XCPE1/Jaspar

Match Rank:1
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GCCGGACCCG
GGGCGGGACC--

PB0153.1_Nr2f2_2/Jaspar

Match Rank:2
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GCCGGACCCG-----
NNNNTGACCCGGCGCG

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GCCGGACCCG
GCCACACCCA

MA0039.2_Klf4/Jaspar

Match Rank:4
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GCCGGACCCG
GCCCCACCCA

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:5
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GCCGGACCCG
GCCMCRCCCH

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:6
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GCCGGACCCG-
GGCCACACCCAN

POL013.1_MED-1/Jaspar

Match Rank:7
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GCCGGACCCG
--CGGAGC--

PB0157.1_Rara_2/Jaspar

Match Rank:8
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GCCGGACCCG-----
NNCNTGACCCCGCTCT

MA0092.1_Hand1::Tcfe2a/Jaspar

Match Rank:9
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GCCGGACCCG
ATGCCAGACN--

MA0493.1_Klf1/Jaspar

Match Rank:10
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GCCGGACCCG
GGCCACACCCA