Information for motif13


Reverse Opposite:

p-value:1e-16
log p-value:-3.725e+01
Information Content per bp:1.845
Number of Target Sequences with motif190.0
Percentage of Target Sequences with motif4.98%
Number of Background Sequences with motif1182.8
Percentage of Background Sequences with motif2.58%
Average Position of motif in Targets107.1 +/- 52.6bp
Average Position of motif in Background94.5 +/- 56.4bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0018.2_CREB1/Jaspar

Match Rank:1
Score:0.94
Offset:0
Orientation:forward strand
Alignment:TGACGTCA
TGACGTCA

Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.94
Offset:0
Orientation:reverse strand
Alignment:TGACGTCA--
TGACGTCATC

JunD(bZIP)/K562-JunD-ChIP-Seq/Homer

Match Rank:3
Score:0.93
Offset:-1
Orientation:forward strand
Alignment:-TGACGTCA---
ATGACGTCATCN

PB0004.1_Atf1_1/Jaspar

Match Rank:4
Score:0.92
Offset:-4
Orientation:forward strand
Alignment:----TGACGTCA----
ACGATGACGTCATCGA

c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.91
Offset:-3
Orientation:reverse strand
Alignment:---TGACGTCA-
NGATGACGTCAT

PB0038.1_Jundm2_1/Jaspar

Match Rank:6
Score:0.90
Offset:-4
Orientation:reverse strand
Alignment:----TGACGTCA----
NCGATGACGTCATCGN

CRE(bZIP)/Promoter/Homer

Match Rank:7
Score:0.90
Offset:-1
Orientation:reverse strand
Alignment:-TGACGTCA---
GTGACGTCACCG

MA0492.1_JUND_(var.2)/Jaspar

Match Rank:8
Score:0.86
Offset:-5
Orientation:forward strand
Alignment:-----TGACGTCA--
AAAGATGATGTCATC

MA0488.1_JUN/Jaspar

Match Rank:9
Score:0.85
Offset:-4
Orientation:forward strand
Alignment:----TGACGTCA-
AAGATGATGTCAT

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:10
Score:0.83
Offset:2
Orientation:reverse strand
Alignment:TGACGTCA
--ACGTCA