Information for motif17


Reverse Opposite:

p-value:1e-13
log p-value:-3.151e+01
Information Content per bp:1.930
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif0.37%
Number of Background Sequences with motif8.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets104.1 +/- 43.2bp
Average Position of motif in Background111.9 +/- 71.2bp
Strand Bias (log2 ratio + to - strand density)-1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown-ESC-element/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:CATCCTGCAGAG
CCCCCTGCTGTG

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:2
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CATCCTGCAGAG
ACATCCTGNT---

PB0205.1_Zic1_2/Jaspar

Match Rank:3
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CATCCTGCAGAG---
TNTCCTGCTGTGNNG

PB0207.1_Zic3_2/Jaspar

Match Rank:4
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CATCCTGCAGAG---
NNTCCTGCTGTGNNN

PB0206.1_Zic2_2/Jaspar

Match Rank:5
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CATCCTGCAGAG---
TCNCCTGCTGNGNNN

PB0091.1_Zbtb3_1/Jaspar

Match Rank:6
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CATCCTGCAGAG-----
NNNANTGCAGTGCNNTT

SA0002.1_at_AC_acceptor/Jaspar

Match Rank:7
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CATCCTGCAGAG---------
-NNCCTGNAAAAAAAAAAAAA

MA0475.1_FLI1/Jaspar

Match Rank:8
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---CATCCTGCAGAG
CCACTTCCTGT----

ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer

Match Rank:9
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--CATCCTGCAGAG
CACTTCCTGT----

ETS:RUNX/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:10
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----CATCCTGCAGAG
ACCACATCCTGT----