Information for motif20


Reverse Opposite:

p-value:1e-11
log p-value:-2.600e+01
Information Content per bp:1.973
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.18%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets123.0 +/- 64.8bp
Average Position of motif in Background142.6 +/- 22.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0126.1_Gata5_2/Jaspar

Match Rank:1
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--TACAGATCTCAG---
GACAGAGATATCAGTGT

MA0483.1_Gfi1b/Jaspar

Match Rank:2
Score:0.60
Offset:3
Orientation:forward strand
Alignment:TACAGATCTCAG--
---AAATCACAGCA

GFY-Staf/Promoters/Homer

Match Rank:3
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---TACAGATCTCAG-----
AACTACAATTCCCAGAATGC

MA0512.1_Rxra/Jaspar

Match Rank:4
Score:0.57
Offset:2
Orientation:forward strand
Alignment:TACAGATCTCAG-
--CAAAGGTCAGA

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:5
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TACAGATCTCAG-----
NNNAGATCAAAGGANNN

PB0040.1_Lef1_1/Jaspar

Match Rank:6
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TACAGATCTCAG-----
NANAGATCAAAGGGNNN

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:7
Score:0.55
Offset:3
Orientation:forward strand
Alignment:TACAGATCTCAG-
---AAATCACTGC

MA0038.1_Gfi1/Jaspar

Match Rank:8
Score:0.54
Offset:2
Orientation:forward strand
Alignment:TACAGATCTCAG
--CAAATCACTG

PB0099.1_Zfp691_1/Jaspar

Match Rank:9
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--TACAGATCTCAG---
CGAACAGTGCTCACTAT

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:10
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---TACAGATCTCAG--
AAGGCCAGATGGTCCGG