Information for motif4


Reverse Opposite:

p-value:1e-103
log p-value:-2.391e+02
Information Content per bp:1.566
Number of Target Sequences with motif818.0
Percentage of Target Sequences with motif21.44%
Number of Background Sequences with motif4403.8
Percentage of Background Sequences with motif9.62%
Average Position of motif in Targets100.0 +/- 54.0bp
Average Position of motif in Background100.9 +/- 60.2bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.19
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0593.1_FOXP2/Jaspar

Match Rank:1
Score:0.89
Offset:1
Orientation:reverse strand
Alignment:SWTTGTTTRC--
-TNTGTTTACTT

PB0017.1_Foxj3_1/Jaspar

Match Rank:2
Score:0.89
Offset:-2
Orientation:reverse strand
Alignment:--SWTTGTTTRC-----
NNNTTTGTTTACNTTNN

MA0031.1_FOXD1/Jaspar

Match Rank:3
Score:0.88
Offset:2
Orientation:reverse strand
Alignment:SWTTGTTTRC
--ATGTTTAC

PB0016.1_Foxj1_1/Jaspar

Match Rank:4
Score:0.88
Offset:-3
Orientation:reverse strand
Alignment:---SWTTGTTTRC---
NNNNTTTGTTTACNNT

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan et al.)/Homer

Match Rank:5
Score:0.88
Offset:2
Orientation:forward strand
Alignment:SWTTGTTTRC
--CTGTTTAC

FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer

Match Rank:6
Score:0.88
Offset:0
Orientation:forward strand
Alignment:SWTTGTTTRC--
NYYTGTTTACHN

MA0084.1_SRY/Jaspar

Match Rank:7
Score:0.87
Offset:1
Orientation:reverse strand
Alignment:SWTTGTTTRC
-ATTGTTTAN

MA0481.1_FOXP1/Jaspar

Match Rank:8
Score:0.87
Offset:0
Orientation:reverse strand
Alignment:SWTTGTTTRC-----
CTTTGTTTACTTTTN

MA0030.1_FOXF2/Jaspar

Match Rank:9
Score:0.87
Offset:1
Orientation:reverse strand
Alignment:SWTTGTTTRC-----
-NTTGTTTACGTTNN

MA0157.1_FOXO3/Jaspar

Match Rank:10
Score:0.86
Offset:3
Orientation:reverse strand
Alignment:SWTTGTTTRC-
---TGTTTACA