Information for motif13


Reverse Opposite:

p-value:1e-21
log p-value:-4.870e+01
Information Content per bp:1.610
Number of Target Sequences with motif667.0
Percentage of Target Sequences with motif12.10%
Number of Background Sequences with motif3665.5
Percentage of Background Sequences with motif8.33%
Average Position of motif in Targets100.4 +/- 55.0bp
Average Position of motif in Background96.9 +/- 56.4bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

CRE(bZIP)/Promoter/Homer

Match Rank:1
Score:0.87
Offset:-4
Orientation:forward strand
Alignment:----GACGTCAC
CGGTGACGTCAC

MA0018.2_CREB1/Jaspar

Match Rank:2
Score:0.86
Offset:-1
Orientation:reverse strand
Alignment:-GACGTCAC
TGACGTCA-

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:3
Score:0.86
Offset:1
Orientation:reverse strand
Alignment:GACGTCAC
-ACGTCA-

PB0004.1_Atf1_1/Jaspar

Match Rank:4
Score:0.83
Offset:-5
Orientation:reverse strand
Alignment:-----GACGTCAC---
NCGATGACGTCATCGN

Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.81
Offset:-1
Orientation:reverse strand
Alignment:-GACGTCAC-
TGACGTCATC

JunD(bZIP)/K562-JunD-ChIP-Seq/Homer

Match Rank:6
Score:0.79
Offset:-2
Orientation:forward strand
Alignment:--GACGTCAC--
ATGACGTCATCN

PB0038.1_Jundm2_1/Jaspar

Match Rank:7
Score:0.79
Offset:-5
Orientation:forward strand
Alignment:-----GACGTCAC---
CCGATGACGTCATCGT

c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.75
Offset:-4
Orientation:reverse strand
Alignment:----GACGTCAC
NGATGACGTCAT

MA0067.1_Pax2/Jaspar

Match Rank:9
Score:0.70
Offset:2
Orientation:forward strand
Alignment:GACGTCAC--
--AGTCACGC

MA0492.1_JUND_(var.2)/Jaspar

Match Rank:10
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---GACGTCAC----
NATGACATCATCNNN