Information for motif15


Reverse Opposite:

p-value:1e-19
log p-value:-4.592e+01
Information Content per bp:1.908
Number of Target Sequences with motif32.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif27.5
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets92.6 +/- 54.2bp
Average Position of motif in Background102.5 +/- 61.1bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1(Zf)/Promoter/Homer

Match Rank:1
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GCGCCATATA-
GCCGCCATCTTG

MA0095.2_YY1/Jaspar

Match Rank:2
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GCGCCATATA-
GCNGCCATCTTG

PB0009.1_E2F3_1/Jaspar

Match Rank:3
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----GCGCCATATA
ANCGCGCGCCCTTNN

PB0113.1_E2F3_2/Jaspar

Match Rank:4
Score:0.62
Offset:-7
Orientation:reverse strand
Alignment:-------GCGCCATATA
NNNNTTGGCGCCGANNN

PB0112.1_E2F2_2/Jaspar

Match Rank:5
Score:0.62
Offset:-6
Orientation:forward strand
Alignment:------GCGCCATATA-
CCTTCGGCGCCAAAAGG

PB0008.1_E2F2_1/Jaspar

Match Rank:6
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----GCGCCATATA
NTCGCGCGCCTTNNN

CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan et al.)/Homer

Match Rank:7
Score:0.61
Offset:3
Orientation:forward strand
Alignment:GCGCCATATA-----
---CCATATATGGNA

POL006.1_BREu/Jaspar

Match Rank:8
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GCGCCATATA
AGCGCGCC-----

MF0008.1_MADS_class/Jaspar

Match Rank:9
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:GCGCCATATA---
---CCATATATGG

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:10
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GCGCCATATA--
--GCCATCTGTT