Information for motif21


Reverse Opposite:

p-value:1e-12
log p-value:-2.939e+01
Information Content per bp:1.702
Number of Target Sequences with motif63.0
Percentage of Target Sequences with motif1.14%
Number of Background Sequences with motif170.7
Percentage of Background Sequences with motif0.39%
Average Position of motif in Targets108.9 +/- 55.7bp
Average Position of motif in Background102.2 +/- 55.1bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.13
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Fox:Ebox(Forkhead:HLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:1
Score:0.74
Offset:-3
Orientation:forward strand
Alignment:---TCTGTGTATACA--
NNNVCTGWGYAAACASN

MA0047.2_Foxa2/Jaspar

Match Rank:2
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TCTGTGTATACA
NCTAAGTAAACA

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:3
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:TCTGTGTATACA--
--TATGTAAACANG

MA0148.3_FOXA1/Jaspar

Match Rank:4
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:TCTGTGTATACA----
-CAAAGTAAACANNNN

PB0104.1_Zscan4_1/Jaspar

Match Rank:5
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TCTGTGTATACA----
NTNTATGTGCACATNNN

MA0481.1_FOXP1/Jaspar

Match Rank:6
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:TCTGTGTATACA----
-CTTTGTTTACTTTTN

MA0157.1_FOXO3/Jaspar

Match Rank:7
Score:0.63
Offset:4
Orientation:forward strand
Alignment:TCTGTGTATACA
----TGTAAACA

PB0016.1_Foxj1_1/Jaspar

Match Rank:8
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TCTGTGTATACA--
NNNNTTTGTTTACNNT

MA0593.1_FOXP2/Jaspar

Match Rank:9
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:TCTGTGTATACA-
--TNTGTTTACTT

PB0018.1_Foxk1_1/Jaspar

Match Rank:10
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TCTGTGTATACA----
NNNTTTGTTTACATTTN