Information for motif22


Reverse Opposite:

p-value:1e-9
log p-value:-2.164e+01
Information Content per bp:1.788
Number of Target Sequences with motif32.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif67.9
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets122.4 +/- 49.9bp
Average Position of motif in Background84.7 +/- 55.8bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0109.1_Bbx_2/Jaspar

Match Rank:1
Score:0.75
Offset:-6
Orientation:reverse strand
Alignment:------GTTAACGCTT-
NNNNCTGTTAACNNTNN

Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer

Match Rank:2
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-GTTAACGCTT--
GGTTAAACATTAA

MA0153.1_HNF1B/Jaspar

Match Rank:3
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GTTAACGCTT--
GTTAAATATTAA

MA0046.1_HNF1A/Jaspar

Match Rank:4
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GTTAACGCTT---
GGTTAATAATTAAC

PB0046.1_Mybl1_1/Jaspar

Match Rank:5
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--GTTAACGCTT-----
NNANTAACGGTTNNNAN

PB0045.1_Myb_1/Jaspar

Match Rank:6
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GTTAACGCTT-----
NNNNTAACGGTTNNNAN

PH0168.1_Hnf1b/Jaspar

Match Rank:7
Score:0.62
Offset:-7
Orientation:reverse strand
Alignment:-------GTTAACGCTT
ANNNCTAGTTAACNGNN

PB0081.1_Tcf1_1/Jaspar

Match Rank:8
Score:0.61
Offset:-6
Orientation:reverse strand
Alignment:------GTTAACGCTT-
NNNTTAGTTAACTNANN

MA0069.1_Pax6/Jaspar

Match Rank:9
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GTTAACGCTT-----
-TTCACGCATGAGTT

MA0030.1_FOXF2/Jaspar

Match Rank:10
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---GTTAACGCTT-
NTTGTTTACGTTNN