Information for motif24


Reverse Opposite:

p-value:1e-6
log p-value:-1.610e+01
Information Content per bp:1.975
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif0.24%
Number of Background Sequences with motif15.2
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets101.5 +/- 53.8bp
Average Position of motif in Background98.0 +/- 30.3bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0597.1_THAP1/Jaspar

Match Rank:1
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CCGCCCAGAT
CTGCCCGCA-

PB0143.1_Klf7_2/Jaspar

Match Rank:2
Score:0.63
Offset:-6
Orientation:forward strand
Alignment:------CCGCCCAGAT-
AAGCATACGCCCAACTT

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:3
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CCGCCCAGAT-------
AAGGCCAGATGGTCCGG

Egr2/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:4
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CCGCCCAGAT-
YCCGCCCACGCN

PB0039.1_Klf7_1/Jaspar

Match Rank:5
Score:0.61
Offset:-6
Orientation:forward strand
Alignment:------CCGCCCAGAT
TCGACCCCGCCCCTAT

POL003.1_GC-box/Jaspar

Match Rank:6
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----CCGCCCAGAT
NAGCCCCGCCCCCN-

MA0599.1_KLF5/Jaspar

Match Rank:7
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---CCGCCCAGAT
GCCCCGCCCC---

POL011.1_XCPE1/Jaspar

Match Rank:8
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----CCGCCCAGAT
GGTCCCGCCC----

PB0110.1_Bcl6b_2/Jaspar

Match Rank:9
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----CCGCCCAGAT--
ATCCCCGCCCCTAAAA

PB0202.1_Zfp410_2/Jaspar

Match Rank:10
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----CCGCCCAGAT--
TCACCCCGCCCCAAATT