Information for motif25


Reverse Opposite:

p-value:1e-5
log p-value:-1.244e+01
Information Content per bp:1.930
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.15%
Number of Background Sequences with motif7.2
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets79.1 +/- 46.4bp
Average Position of motif in Background113.0 +/- 33.2bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.75
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.57
Offset:0
Orientation:forward strand
Alignment:ACACTCTGAGGC
ATGCCCTGAGGC

MA0524.1_TFAP2C/Jaspar

Match Rank:2
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:ACACTCTGAGGC----
-TGCCCTGGGGCNANN

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:3
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:ACACTCTGAGGC
WTGSCCTSAGGS

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:4
Score:0.55
Offset:0
Orientation:forward strand
Alignment:ACACTCTGAGGC---
ATTGCCTGAGGCAAT

MA0003.2_TFAP2A/Jaspar

Match Rank:5
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:ACACTCTGAGGC----
-TGCCCTGAGGCANTN

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:6
Score:0.52
Offset:0
Orientation:forward strand
Alignment:ACACTCTGAGGC---
ATTGCCTGAGGCGAA

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:7
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--ACACTCTGAGGC
AASCACTCAA----

MA0002.2_RUNX1/Jaspar

Match Rank:8
Score:0.50
Offset:3
Orientation:forward strand
Alignment:ACACTCTGAGGC--
---GTCTGTGGTTT

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:9
Score:0.50
Offset:0
Orientation:forward strand
Alignment:ACACTCTGAGGC---
ATTCCCTGAGGGGAA

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:10
Score:0.49
Offset:-4
Orientation:reverse strand
Alignment:----ACACTCTGAGGC
GGCCACACCCAN----