Information for motif4


Reverse Opposite:

p-value:1e-129
log p-value:-2.978e+02
Information Content per bp:1.708
Number of Target Sequences with motif1248.0
Percentage of Target Sequences with motif22.64%
Number of Background Sequences with motif4904.0
Percentage of Background Sequences with motif11.14%
Average Position of motif in Targets101.5 +/- 53.1bp
Average Position of motif in Background92.5 +/- 58.6bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.37
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Sp1(Zf)/Promoter/Homer

Match Rank:1
Score:0.94
Offset:1
Orientation:forward strand
Alignment:WRGCCCCGCCCC-
-GGCCCCGCCCCC

POL003.1_GC-box/Jaspar

Match Rank:2
Score:0.94
Offset:0
Orientation:reverse strand
Alignment:WRGCCCCGCCCC--
NAGCCCCGCCCCCN

MA0079.3_SP1/Jaspar

Match Rank:3
Score:0.92
Offset:2
Orientation:forward strand
Alignment:WRGCCCCGCCCC-
--GCCCCGCCCCC

MA0599.1_KLF5/Jaspar

Match Rank:4
Score:0.92
Offset:2
Orientation:forward strand
Alignment:WRGCCCCGCCCC
--GCCCCGCCCC

MA0516.1_SP2/Jaspar

Match Rank:5
Score:0.90
Offset:2
Orientation:forward strand
Alignment:WRGCCCCGCCCC-----
--GCCCCGCCCCCTCCC

MA0039.2_Klf4/Jaspar

Match Rank:6
Score:0.89
Offset:2
Orientation:reverse strand
Alignment:WRGCCCCGCCCC
--GCCCCACCCA

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:7
Score:0.88
Offset:2
Orientation:reverse strand
Alignment:WRGCCCCGCCCC
--GCCMCRCCCH

PB0039.1_Klf7_1/Jaspar

Match Rank:8
Score:0.87
Offset:-1
Orientation:forward strand
Alignment:-WRGCCCCGCCCC---
TCGACCCCGCCCCTAT

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.78
Offset:3
Orientation:reverse strand
Alignment:WRGCCCCGCCCC
---CCCCCCCC-

PB0110.1_Bcl6b_2/Jaspar

Match Rank:10
Score:0.77
Offset:1
Orientation:forward strand
Alignment:WRGCCCCGCCCC-----
-ATCCCCGCCCCTAAAA