Information for motif6


Reverse Opposite:

p-value:1e-56
log p-value:-1.309e+02
Information Content per bp:1.683
Number of Target Sequences with motif687.0
Percentage of Target Sequences with motif12.46%
Number of Background Sequences with motif2876.6
Percentage of Background Sequences with motif6.53%
Average Position of motif in Targets100.2 +/- 55.4bp
Average Position of motif in Background99.6 +/- 61.4bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0071.1_Sox4_1/Jaspar

Match Rank:1
Score:0.87
Offset:-5
Orientation:reverse strand
Alignment:-----CTTTGWTY----
TNNTCCTTTGTTCTNNT

PB0061.1_Sox11_1/Jaspar

Match Rank:2
Score:0.87
Offset:-5
Orientation:reverse strand
Alignment:-----CTTTGWTY----
NNNTCCTTTGTTCTNNN

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:3
Score:0.86
Offset:-5
Orientation:forward strand
Alignment:-----CTTTGWTY----
ATTTCCTTTGATCTATA

MA0514.1_Sox3/Jaspar

Match Rank:4
Score:0.86
Offset:-1
Orientation:forward strand
Alignment:-CTTTGWTY-
CCTTTGTTTT

PB0040.1_Lef1_1/Jaspar

Match Rank:5
Score:0.85
Offset:-5
Orientation:forward strand
Alignment:-----CTTTGWTY----
AATCCCTTTGATCTATC

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:6
Score:0.84
Offset:-1
Orientation:forward strand
Alignment:-CTTTGWTY
CCWTTGTY-

PB0082.1_Tcf3_1/Jaspar

Match Rank:7
Score:0.84
Offset:-5
Orientation:reverse strand
Alignment:-----CTTTGWTY----
NNTTCCTTTGATCTANA

MA0515.1_Sox6/Jaspar

Match Rank:8
Score:0.83
Offset:-1
Orientation:forward strand
Alignment:-CTTTGWTY-
CCATTGTTTT

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:9
Score:0.83
Offset:-3
Orientation:reverse strand
Alignment:---CTTTGWTY-
TNCCTTTGATGT

MA0143.3_Sox2/Jaspar

Match Rank:10
Score:0.83
Offset:-1
Orientation:forward strand
Alignment:-CTTTGWTY
CCTTTGTT-